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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5705655_5706294_F

Intron Information:

Intron Rank:

137301

Intron Class:

major

Intron Phase:

Intron Coordinates:

5705655 - 5706294

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAA

U12 Branch Point Sequence:

TTCTCCTTTCTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

52.4

0.06

1.1

48.9

36.6

Major PPT

83.3

0.75

0.7

76.9

31.9

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

45.8

-0.2

3.6

79.57

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036109

5703781 - 5706879

3099