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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57186445_57188343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57186445 - 57188343

Intron Length:

1899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAG

U12 Branch Point Sequence:

TGTGGATTAAGC

Flanking Amino Acid:

EHNRDLSFLKTIQEVAGYVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

77.3

37.8

Major BPS

50.1

1.6

61.7

43.1

Major PPT

84.3

0.77

0.8

81.2

36.5

Minor 5ss

30.8

-2.2

3.1

41.8

44.7

Minor BPS

-0.4

2.3

59.92

Associated Gene:

Gene:

EGFR

Ensembl Gene ID:

ENSAPLG00000002987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028473

57164464 - 57200806

36343

ENSAPLT00000003154

57076769 - 57228374

151606