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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57425558_57443222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57425558 - 57443222

Intron Length:

17665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

TTTTTTTTGTCA

Flanking Amino Acid:

MEEINKMFGTVVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

31.8

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

90.1

0.9

0.8

92.3

26.6

Minor 5ss

29.3

-2.4

2.9

35.1

41.4

Minor BPS

47.6

-0.1

3.4

77.15

33.9

Associated Gene:

Gene:

BLVRA

Ensembl Gene ID:

ENSAPLG00000003819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003918

57409839 - 57443231

33393