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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57494602_57496553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57494602 - 57496553

Intron Length:

1952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

TTTACATCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GAATCTCTAACA

Flanking Amino Acid:

SNRVDTERAQIKLPVSGTKS

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

80.7

0.69

0.8

74.4

35.2

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

59.7

0.3

1.7

67.39

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032750

57446800 - 57499411

52612

ENSAPLT00000023242

57446800 - 57496820

50021