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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57550241_57551482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57550241 - 57551482

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTGC

5'SS Class:

major

3'SS Sequence:

CTTCTTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTGAATTTAATT

Flanking Amino Acid:

DWRNNTEYRGGYHDGHIVIR

Intron Amino Acid Position:

1504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

66.5

40.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

73.6

0.53

0.9

72.8

37.5

Minor 5ss

43.5

-0.7

59.3

45.5

Minor BPS

57.4

0.31

1.5

70.32

40.8

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014