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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57552850_57557039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57552850 - 57557039

Intron Length:

4190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTTACCATACTA

Flanking Amino Acid:

FTVNEEVFGQVTERELKSGG

Intron Amino Acid Position:

1417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.7

33.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

76.5

0.6

0.8

69.5

36.8

Minor 5ss

34.2

-1.8

2.8

40.7

45.3

Minor BPS

49.6

-0

1.9

66.01

40.3

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014