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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57557170_57558627_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57557170 - 57558627

Intron Length:

1458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GCCTCACAACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CGTCTTTTATCT

Flanking Amino Acid:

TRPFYKALLRLPCDLSDLEY

Intron Amino Acid Position:

1373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

57.1

0.16

48.4

38.6

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

54.1

0.21

1.6

69.28

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014