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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57558727_57578848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57558727 - 57578848

Intron Length:

20122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTATCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATTTACT

Flanking Amino Acid:

MSAFVENHLEWFRFSGRILG

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

78.6

0.71

79.6

32.9

Major PPT

81.7

0.71

0.9

40.4

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

61.5

0.44

1.9

79.82

41.7

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014