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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57583552_57585744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57583552 - 57585744

Intron Length:

2193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

AAGCCCTTATAC

Flanking Amino Acid:

SPCSSPQNSPGLQRASARAP

Intron Amino Acid Position:

1211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

75.2

0.57

0.9

67.9

38.9

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

49.6

-0

1.7

57.23

40.7

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014