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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57585855_57586885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57585855 - 57586885

Intron Length:

1031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTACATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ACTTCTTTATAT

Flanking Amino Acid:

SCDADLVILLSLFEEDIMSY

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

83.5

0.75

0.9

78.9

33.6

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

60.2

0.4

1.7

75.29

41.6

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014