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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57613037_57616498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57613037 - 57616498

Intron Length:

3462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGATCC

5'SS Class:

major

3'SS Sequence:

ATCTTGTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ATGTCTTGAATA

Flanking Amino Acid:

PIAGPSSRREGECPLLHNSQ

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

70.7

34.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

70.9

0.47

0.9

35.3

Minor 5ss

35.6

-1.6

2.8

43.8

43.5

Minor BPS

0.47

1.4

70.38

36.1

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014