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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57617861_57619078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57617861 - 57619078

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GAGTACGTAATT

Flanking Amino Acid:

RFEITSSIHPDDEEVSISAD

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.3

0.52

0.9

68.4

36.4

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

48.5

-0

2.2

66.89

43.7

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014