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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57621315_57634813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57621315 - 57634813

Intron Length:

13499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

ACCAGCTTCATG

Flanking Amino Acid:

NTVNPIWQGEQFSFVSLPTD

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

41.7

-0.8

2.1

41.48

43.9

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004165

57541647 - 57795660

254014

ENSAPLT00000040914

57541647 - 57735379

193733