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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57634984_57644556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57634984 - 57644556

Intron Length:

9573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

AACCTTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATCT

Flanking Amino Acid:

SRRLISFSLSDFQAFGLKKG

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

77.3

0.61

0.9

73.6

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

63.9

0.52

1.8

83.32

37.6

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014