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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57701222_57716428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57701222 - 57716428

Intron Length:

15207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTCATGTTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTTTGTTCATG

Flanking Amino Acid:

AGDWIGMYLIDEVLSENFLD

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

84.8

0.86

85.7

34.9

Major PPT

73.3

0.52

0.9

68.1

37.5

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

46.1

-0.4

2.4

57.74

Associated Gene:

Gene:

HECW1

Ensembl Gene ID:

ENSAPLG00000004015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040914

57541647 - 57735379

193733

ENSAPLT00000004165

57541647 - 57795660

254014