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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5777939_5781076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5777939 - 5781076

Intron Length:

3138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

AAATATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TCTGGCTCTACT

Flanking Amino Acid:

NYENNAGFWNRMEMYCRELT

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

67.7

0.4

1.1

62.7

47.1

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

45.4

-0.2

2.3

68.02

48.4

Associated Gene:

Gene:

EXOG

Ensembl Gene ID:

ENSAPLG00000012196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012712

5766354 - 5787774

21421