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Intron Name: Anas_platyrhynchos_platyrhynchos_2_57878722_57880531_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57878722 - 57880531

Intron Length:

1810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCCCGC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TAATATGGAAAA

Flanking Amino Acid:

AATASPSPPSAANGVVLATE

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

45.2

44.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

37.2

-1.4

3.3

51.1

45.5

Minor BPS

-0.6

2.1

52.88

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045319

57877881 - 57883618

5738