Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_5808640_5809713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5808640 - 5809713

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATCTTTGATG

Flanking Amino Acid:

YVAVKIFPIQDKQSWQSERE

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

0.85

0.9

39.9

Major PPT

71.4

0.48

0.8

31.5

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

64.5

0.31

1.3

63.58

38.7

Associated Gene:

Gene:

ACVR2B

Ensembl Gene ID:

ENSAPLG00000012223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012770

5798248 - 5816727

18480