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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58090317_58092083_F

Intron Information:

Intron Rank:

131329

Intron Class:

major

Intron Phase:

Intron Coordinates:

58090317 - 58092083

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAATA

5'SS Class:

major

3'SS Sequence:

CTGTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

GTTTATTTCAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

73.5

37.2

Major BPS

72.5

0.56

1.1

63.4

Major PPT

87.5

0.84

0.8

80.3

37.3

Minor 5ss

35.8

-1.6

3.3

45.4

Minor BPS

48.5

-0

2.2

73.23

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024934

58087531 - 58102383

14853