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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58180560_58228157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58180560 - 58228157

Intron Length:

47598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

ATACTCAGATCT

Flanking Amino Acid:

PRNGYMDPHYHPPHLFPAFH

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.3

78.2

37.9

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

38.1

-1.3

41.5

Minor BPS

43.9

-0.3

1.9

62.84

40.5

Associated Gene:

Gene:

GLI3

Ensembl Gene ID:

ENSAPLG00000004361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004545

58108456 - 58322051

213596