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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58251667_58257299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58251667 - 58257299

Intron Length:

5633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTTAA

5'SS Class:

major

3'SS Sequence:

GTTGTGTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACGTCATTAACG

Flanking Amino Acid:

SAARGLSPTDAPHAGVSPAE

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

67.6

35.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.4

0.59

0.9

73.5

41.9

Minor 5ss

33.2

-1.9

3.1

39.8

46.2

Minor BPS

62.3

0.25

1.7

62.94

44.7

Associated Gene:

Gene:

GLI3

Ensembl Gene ID:

ENSAPLG00000004361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004545

58108456 - 58322051

213596