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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58310069_58310664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58310069 - 58310664

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTTGTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTTTTCTTACTT

Flanking Amino Acid:

HTGEKPHKCTFEGCTKAYSR

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

85.6

0.8

80.6

31.4

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

68.4

0.66

1.6

82.74

39.5

Associated Gene:

Gene:

GLI3

Ensembl Gene ID:

ENSAPLG00000004361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004545

58108456 - 58322051

213596