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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58315023_58318264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58315023 - 58318264

Intron Length:

3242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGCAAT

5'SS Class:

major

3'SS Sequence:

TGCACTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TCTTCTTGCACT

Flanking Amino Acid:

VKAVKAEKPMTSQPSPGGQS

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

72.3

38.6

Major BPS

69.2

0.48

1.3

71.9

Major PPT

64.8

0.33

58.6

37.1

Minor 5ss

47.3

-0.3

2.6

62.6

43.4

Minor BPS

59.6

0.38

1.9

80.32

41.9

Associated Gene:

Gene:

GLI3

Ensembl Gene ID:

ENSAPLG00000004361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004545

58108456 - 58322051

213596