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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58776758_58915406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58776758 - 58915406

Intron Length:

138649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TTCCTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTCCTTTTAACA

Flanking Amino Acid:

NMQQVFSDPQVLHNGLLMEM

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

83.1

0.74

0.8

80.2

30.3

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

71.9

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

SUGCT

Ensembl Gene ID:

ENSAPLG00000004741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027393

58628110 - 59048888

420779

ENSAPLT00000026243

58568930 - 59048888

479959

ENSAPLT00000004880

58635722 - 59048888

413167