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Intron Name: Anas_platyrhynchos_platyrhynchos_2_58988010_59004089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58988010 - 59004089

Intron Length:

16080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCATTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTCCTGAATA

Flanking Amino Acid:

HIDCNLMSSQVACLTHVAAN

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.3

0.73

0.7

77.1

30.4

Minor 5ss

-1.7

3.8

55.2

Minor BPS

74.6

0.77

1.4

80.19

Associated Gene:

Gene:

SUGCT

Ensembl Gene ID:

ENSAPLG00000004741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027393

58628110 - 59048888

420779

ENSAPLT00000026243

58568930 - 59048888

479959

ENSAPLT00000004880

58635722 - 59048888

413167