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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59034262_59039039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59034262 - 59039039

Intron Length:

4778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

AGCTCATTAACA

Flanking Amino Acid:

NSRGAKIIRELAAVSDVFVE

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

80.2

0.68

0.9

82.2

27.1

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

66.9

0.53

1.6

72.09

39.4

Associated Gene:

Gene:

SUGCT

Ensembl Gene ID:

ENSAPLG00000004741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004880

58635722 - 59048888

413167

ENSAPLT00000027393

58628110 - 59048888

420779

ENSAPLT00000026243

58568930 - 59048888

479959