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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59039091_59040047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59039091 - 59040047

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACCTAATG

Flanking Amino Acid:

YFLSVNRNKKSIAINMKNSR

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.8

0.87

0.7

81.3

36.4

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

61.5

0.22

1.9

73.36

Associated Gene:

Gene:

SUGCT

Ensembl Gene ID:

ENSAPLG00000004741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004880

58635722 - 59048888

413167

ENSAPLT00000027393

58628110 - 59048888

420779

ENSAPLT00000026243

58568930 - 59048888

479959