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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59040134_59045190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59040134 - 59045190

Intron Length:

5057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

ATAAAAAAAAAA

Flanking Amino Acid:

GAEVIKVERPGAGDDTRAWG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

69.8

0.49

70.3

31.8

Major PPT

0.76

0.8

81.4

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

-1.1

44.69

36.1

Associated Gene:

Gene:

SUGCT

Ensembl Gene ID:

ENSAPLG00000004741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027393

58628110 - 59048888

420779

ENSAPLT00000026243

58568930 - 59048888

479959

ENSAPLT00000004880

58635722 - 59048888

413167