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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59153989_59164182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59153989 - 59164182

Intron Length:

10194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AGAAAACTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

62.6

42.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

39.9

-1.1

3.4

56.3

43.2

Minor BPS

-0.9

1.9

36.4

Associated Gene:

Gene:

RALA

Ensembl Gene ID:

ENSAPLG00000004950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036494

59146231 - 59164272

18042