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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59186492_59188912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59186492 - 59188912

Intron Length:

2421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AAACCAGTAATT

Flanking Amino Acid:

VICDDLVEHLSEMKAKGYLA

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

80.1

0.68

0.7

72.4

32.3

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

45.8

-0.2

2.2

63.61

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035200

59182391 - 59197750

15360