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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59188804_59188912_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59188804 - 59188912

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCAACT

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AAACCAGTAATT

Flanking Amino Acid:

LSNLYQIPGNSEMKAKGYLA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.4

61.1

43.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

80.1

0.68

0.7

72.4

32.3

Minor 5ss

36.6

-1.5

3.1

45.1

Minor BPS

45.8

-0.2

2.2

63.61

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034111

59182391 - 59197750

15360

ENSAPLT00000005190

59182391 - 59197750

15360