Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_59195403_59195757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59195403 - 59195757

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATACCTCTAATT

Flanking Amino Acid:

SCVSEKHTNEDDSELLYFEV

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

84.2

0.77

0.8

82.6

33.5

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

57.1

0.3

1.6

73.68

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035200

59182391 - 59197750

15360

ENSAPLT00000005190

59182391 - 59197750

15360