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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59281220_59290434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59281220 - 59290434

Intron Length:

9215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AATATTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

AATATTTCAACA

Flanking Amino Acid:

SALSVGQLVSNPQTATGEVD

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

68.1

0.45

73.5

28.6

Major PPT

68.9

0.42

63.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

54.6

0.14

1.5

63.76

36.1

Associated Gene:

Gene:

POU6F2

Ensembl Gene ID:

ENSAPLG00000005140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005304

59276887 - 59535081

258195

ENSAPLT00000041108

59277162 - 59531173

254012