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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59332267_59373256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59332267 - 59373256

Intron Length:

40990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTCACCATGATT

Flanking Amino Acid:

SPLTSPNPLQLVNNPLASQA

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

-2.2

3.3

45.6

Minor BPS

58.6

0.35

1.7

76.89

39.8

Associated Gene:

Gene:

POU6F2

Ensembl Gene ID:

ENSAPLG00000005140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041108

59277162 - 59531173

254012

ENSAPLT00000005304

59276887 - 59535081

258195