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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59530383_59534638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59530383 - 59534638

Intron Length:

4256

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TTTTCCCTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.7

82.7

36.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

66.4

0.37

0.8

58.2

31.6

Minor 5ss

27.5

-2.6

3.9

40.4

45.7

Minor BPS

78.6

0.98

1.6

96.61

28.1

Associated Gene:

Gene:

POU6F2

Ensembl Gene ID:

ENSAPLG00000005140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005304

59276887 - 59535081

258195