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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59624043_59638213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59624043 - 59638213

Intron Length:

14171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGCTTTTAAAA

Flanking Amino Acid:

YNEESTDESEEDESEEEPKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.8

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.6

0.31

56.6

42.4

Minor 5ss

37.8

-1.4

49.5

46.7

Minor BPS

58.1

0.25

1.4

63.93

36.1

Associated Gene:

Gene:

VPS41

Ensembl Gene ID:

ENSAPLG00000005152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030424

59619859 - 59726451

106593

ENSAPLT00000029096

59619859 - 59726451

106593

ENSAPLT00000005433

59619859 - 59726726

106868

ENSAPLT00000044720

59619859 - 59726451

106593