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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59627215_59638213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59627215 - 59638213

Intron Length:

10999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

TTTAAAAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGCTTTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

56.4

43.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.6

0.31

56.6

42.4

Minor 5ss

35.6

-1.6

3.3

43.6

Minor BPS

58.1

0.25

1.4

63.93

36.1

Associated Gene:

Gene:

VPS41

Ensembl Gene ID:

ENSAPLG00000005152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046230

59624004 - 59726451

102448