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Intron Name: Anas_platyrhynchos_platyrhynchos_2_59854426_59856697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59854426 - 59856697

Intron Length:

2272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCATATCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

EPAKPAEQAAQTLEQVISTS

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

0.8

66.4

34.5

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

AMPH

Ensembl Gene ID:

ENSAPLG00000005709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047161

59753521 - 59872860

119340

ENSAPLT00000030911

59753521 - 59872860

119340

ENSAPLT00000017702

59753521 - 59872860

119340