Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59986526 - 59987513

Intron Length:

988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTCCTTTTATCT

Flanking Amino Acid:

EQDITTLEQNVGRLEGQVAR

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

77.4

37.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.7

0.67

72.9

42.2

Minor 5ss

39.3

-1.2

56.4

40.7

Minor BPS

53.1

0.18

1.6

68.05

43.5

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

Intron Name: Anas_platyrhynchos_platyrhynchos_2_59986526_59987513_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: