Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59987594 - 59987794

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

GSDLQLIEMQRDANRQISEY

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

73.4

37.3

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

46.7

-0.3

2.5

42.5

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

Intron Name: Anas_platyrhynchos_platyrhynchos_2_59987594_59987794_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: