Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59987916 - 59988941

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACAA

Flanking Amino Acid:

AGEKEELLSQVRKLKMQLEE

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.1

0.68

0.9

76.9

36.6

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

62.2

0.38

1.7

75.65

35.9

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

Intron Name: Anas_platyrhynchos_platyrhynchos_2_59987916_59988941_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: