Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59995549 - 59996157

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGATT

5'SS Class:

major

3'SS Sequence:

TTATTTGATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGCTTATTT

Flanking Amino Acid:

FYRENEEKSKELERQKHTCS

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

75.5

40.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

73.8

0.54

69.7

40.5

Minor 5ss

37.2

-1.4

3.5

57.6

46.7

Minor BPS

61.2

0.43

82.08

39.9

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

Intron Name: Anas_platyrhynchos_platyrhynchos_2_59995549_59996157_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: