Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60001245 - 60001972

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

TTGTACCTGATA

Flanking Amino Acid:

EKSHSEIFSRPSSRNSIPLS

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.5

40.6

Major BPS

0.5

59.3

39.1

Major PPT

74.3

0.55

78.5

27.6

Minor 5ss

34.8

-1.7

41.4

44.7

Minor BPS

51.5

0.04

1.9

68.02

38.4

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

Intron Name: Anas_platyrhynchos_platyrhynchos_2_60001245_60001972_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: