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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60002018_60004498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60002018 - 60004498

Intron Length:

2481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTCTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGCATTGTAATC

Flanking Amino Acid:

DADDVQVLNSLEEKSEKSHS

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

64.1

35.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

91.1

0.92

0.7

89.6

25.2

Minor 5ss

29.5

-2.3

3.1

33.3

41.7

Minor BPS

-0.3

54.46

38.4

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176