Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60020518 - 60029603

Intron Length:

9086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

AATTTACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

AAACTTTGAATT

Flanking Amino Acid:

DEALSSIAREAEARLAAKRA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

71.2

0.48

0.9

64.5

37.1

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

50.2

0.08

1.3

62.59

Associated Gene:

Gene:

LRRFIP2

Ensembl Gene ID:

ENSAPLG00000010430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010917

59985535 - 60029710

44176

ENSAPLT00000028631

59985535 - 60029710

44176

ENSAPLT00000044323

59985535 - 60029710

44176

ENSAPLT00000026491

59985535 - 60029710

44176

ENSAPLT00000038165

59983749 - 60029710

45962

ENSAPLT00000023982

59985535 - 60029710

44176

ENSAPLT00000037389

59985535 - 60029710

44176

ENSAPLT00000017864

59985535 - 60029710

44176

ENSAPLT00000034317

59985535 - 60029710

44176

ENSAPLT00000047340

59985535 - 60029710

44176

Intron Name: Anas_platyrhynchos_platyrhynchos_2_60020518_60029603_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: