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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60061705_60068822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

60061705 - 60068822

Intron Length:

7118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CATTGAATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTGAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

61.3

0.26

1.1

54.8

43.6

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

0.36

1.9

81.72

39.6

Associated Gene:

Gene:

GOLGA4

Ensembl Gene ID:

ENSAPLG00000010196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039942

60060957 - 60123842

62886