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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60068922_60072959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60068922 - 60072959

Intron Length:

4038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTCCTTCTAACA

Flanking Amino Acid:

KQPKPQSDGVNLPKQPIPRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

81.6

0.71

0.7

74.4

30.8

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

56.2

0.19

1.7

68.77

37.7

Associated Gene:

Gene:

GOLGA4

Ensembl Gene ID:

ENSAPLG00000010196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029883

60058412 - 60123842

65431

ENSAPLT00000028852

60058412 - 60123842

65431

ENSAPLT00000028431

60058412 - 60123842

65431

ENSAPLT00000039942

60060957 - 60123842

62886

ENSAPLT00000010647

60058412 - 60115611

57200

ENSAPLT00000034480

60058412 - 60123842

65431