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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60090992_60092576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60090992 - 60092576

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCTCATTT

Flanking Amino Acid:

VKQEVVEIMKEKNQSECLKT

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

0.9

76.6

36.3

Minor 5ss

32.4

-2

3.5

48.3

47.4

Minor BPS

68.1

0.65

1.8

88.32

37.1

Associated Gene:

Gene:

GOLGA4

Ensembl Gene ID:

ENSAPLG00000010196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028431

60058412 - 60123842

65431