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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60147074_60148094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60147074 - 60148094

Intron Length:

1021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

GTCTCCTTGCCT

Flanking Amino Acid:

RRCTELDMGRGNSRGVLCGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.3

32.8

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

81.3

0.7

77.1

24.9

Minor 5ss

33.5

-1.9

3.1

44.4

43.7

Minor BPS

48.6

-0

3.5

79.9

42.3

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027172

60138664 - 60345030

206367

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393