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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60160079_60167276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60160079 - 60167276

Intron Length:

7198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

CTTCTCCCACCC

Flanking Amino Acid:

NGRKLLPCYEEYKKKYGEEH

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

73.8

0.54

0.8

66.2

34.8

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

42.8

-0.5

56.28

42.1

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393

ENSAPLT00000027172

60138664 - 60345030

206367